Describe the objectives of the project (for example, addressing certain scientific unknowns, or scientific or clinical needs).
Recurrent mutations in the CTNNB1 gene have been identified with the potential to generate promising candidate neoantigens (Bugter et al.,2021; Parrish et al.,2022). We identified two T cell receptors recognizing neoantigens from a recurrent mutation in CTNNB1. One of the TCRs is restricted by the HLA-A*02:01 allele, while the other TCR is restricted by HLA-A*24:02.
Our in vitro data indicates that T cells expressing the identified CTNNB1mut TCRs efficiently kill cells that naturally express the mutation such as the Hutu80 cell line (small intestine adenocarcinoma). To test the therapeutic effect in vivo, we plan to engraft them into NXG mice after establishing solid tumors that express the target mutation. We also plan to combine the methods listed below:
Anti-VEGFR2 antibody (DC101) injection:
To facilitate T-cell infiltration into solid tumors, one approach is normalizing the tumor vasculature through VEGF blockade (Park et al.,2023; Sun et al.,2021). DC101, which targets mouse VEGFR2, has demonstrated success in normalizing abnormal tumor angiogenesis (Bocci et al.,2004; Lowery et al.,2019; Mashima et al.,2021; Park et al.,2023; Sun et al.,2021). The aim is to enhance T-cell infiltration and induce in vivo antitumor responses.
Reprogramming of target cancer cells:
Dendritic cells type 1 (cDC1) are specialized in recruiting T cells and presenting tumor antigens in tumors, thereby supporting tumor rejection. Our collaborator, Professor Filipe Pereira has previously identified a combination of transcription factors PU.1, IRF8, and BATF3 (PIB), as sufficient to reprogram tumor cells into cDC1-like cells (Rosa et al.,2018). The in vivo use of reprogramming tumor cells already got the ethical permit in Sweden (Link attached). The combinatorial approach may improve T-cell recruitment and killing in in vivo model.
CRISPR-Cas9 mutation knock-in of cell lines:
The CTNNB1 target mutation is frequently detected in cancers that originate from endometrial or pancreatic cancer (Tate et al.,2019). Since there are no established pancreatic or endometrial cancer cell lines that naturally harbor the TCR targeting CTNNB1 mutation, we will perform CRISPR-Cas9 knock-in to introduce the target mutation to the pancreatic cancer cell line (PANC-1) and endometrial cancer cell line (KLE) cells in vitro. These tumor models will provide valuable information about the possible use of the CTNNB1-TCR for treating “hard-to-treat” solid cancers expressing the CTNNB1 target mutation.
What are the potential benefits likely to derive from this project? Explain how science could be advanced, or humans, animals or environment may ultimately benefit from the project. Where applicable, differentiate between short-term benefits (within the duration of the project) and long-term benefits (which may accrue after the project is finished).
The whole study aims to demonstrate the safe and efficacious use of our CTNNB1-targeting TCRs in vivo and will help pave the way for future clinical trials.